PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00609.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CAMTA
Protein Properties Length: 995aa    MW: 111665 Da    PI: 6.4342
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00609.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11802.8e-56201363118
              CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 
                       +e ++rwl++ ei++iL n++k++++ +++++p sgs++L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg++++l+cyYah+e+n++f
  Migut.B00609.1.p  20 SEaQHRWLRPAEIVEILRNYQKFHISPAAPNKPVSGSVFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDMLHCYYAHGEDNENF 112
                       4449***************************************************************************************** PP

              CG-1  95 qrrcywlLeeelekivlvhylevk 118
                       qrr+ywlLe++l +iv++hylevk
  Migut.B00609.1.p 113 QRRSYWLLEQDLMHIVFAHYLEVK 136
                       *********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.37815141IPR005559CG-1 DNA-binding domain
SMARTSM010762.0E-7818136IPR005559CG-1 DNA-binding domain
PfamPF038595.6E-4921135IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.2E-6407494IPR013783Immunoglobulin-like fold
SuperFamilySSF812965.37E-15408494IPR014756Immunoglobulin E-set
PfamPF018337.4E-5408493IPR002909IPT domain
CDDcd002047.35E-14606699No hitNo description
Gene3DG3DSA:1.25.40.202.4E-16606703IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.51E-16607701IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029718.271607701IPR020683Ankyrin repeat-containing domain
PfamPF127962.2E-7612699IPR020683Ankyrin repeat-containing domain
SMARTSM002489.6E-5640669IPR002110Ankyrin repeat
PROSITE profilePS5008810.659640672IPR002110Ankyrin repeat
SMARTSM002482200679708IPR002110Ankyrin repeat
SMARTSM000150.73815837IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.59816845IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525408.23E-8818866IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF006120.0013818836IPR000048IQ motif, EF-hand binding site
SMARTSM000153.8E-4838860IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.109839863IPR000048IQ motif, EF-hand binding site
PfamPF006124.1E-5841860IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 995 aa     Download sequence    Send to blast
MAESGSSSLG FRLDIKQILS EAQHRWLRPA EIVEILRNYQ KFHISPAAPN KPVSGSVFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDMLH CYYAHGEDNE NFQRRSYWLL  120
EQDLMHIVFA HYLEVKGNKT NISSSRNSDT VVSNSENNSV LLSSSFHGTS PSSTLSSACE  180
DAESEDNHQA SSRFHSFPES PLTDGSHYAQ SNSYNPTSSP GQTAFKQESG CYLPVQANWQ  240
DSFEDFSLKL HIPTMNQNLI LNLPPDQGNT SFEEKSLHVN QENFVRPFYT LPGEQKEQSE  300
QKNLQMLLSE AETGHAMNQN MENLSSMGNE NYSLFLKKPS ISGLQKEENL KKADSFSRWI  360
AKELEDYDEL NLQSNNGISW SGYGMPAQLQ VDLDTLNPSI SQDQLFSIMD FSPNWAYTNM  420
KTKVLITGIF LKSEQELSKC RWSIMFGQVE VAAEVLADGI LCCHAPLQKP GLVPFYVTCS  480
NRLACSEIRE FEYRFEQDQS MGGIDERGST NVMHLYQRFE TKLSLETSGS DLNSSGNDFG  540
KQNIINKIFS FMEEENNQEI KLTPEKDTTE LMVIGELLLQ KQLKEKFYTW LFHKLSYDSE  600
SIADVKGGQG VLHLAAALGF NWVLQPIIVS GISIDFRDVN GWTALHWAAH YGREDTVAAL  660
VSLGASPGAL TDPSAEYPLG RTPADLASSS GHKGISGFLA ETTLTTHLST LGVDDPLVHG  720
GSGFSGSRAV QTVSERLAVP TTGEDVPDTL SLKDSLAAIC NATQAAARIH QIFRTQSFHR  780
KQLLEHGGDE SVTPNENAIS LVAGKNSRLG RASGGANAAA VRIQKKFRGW KKRKEFLLIR  840
QKVVKIQAHF RGHQVRKKYK TIIWSVGIME KVILRWRRKR SGLRGFRSDA VAKVESGQGT  900
LPQEDDYDFL KEGRKQTEER MQKALARVKS MAQYPEARAQ YRRLLTAAEG FRETKDASDA  960
EIQETSDDMF YPQDDLIDIE SLLDDDTFMS LAFQ*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828340.10.0PREDICTED: calmodulin-binding transcription activator 2 isoform X1
RefseqXP_012828341.10.0PREDICTED: calmodulin-binding transcription activator 2 isoform X1
SwissprotQ6NPP40.0CMTA2_ARATH; Calmodulin-binding transcription activator 2
TrEMBLA0A022PSL80.0A0A022PSL8_ERYGU; Uncharacterized protein
STRINGSolyc01g105230.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22302146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains